Miscellaneous software

CofI and Cy2T

Calculates coefficients of inbreeding from pedigrees (including extraction of pedigree data from Cyrillic files).

Decode2Affy, Illumina2Affy and PLink2Affy

Converts deCode, Illumina and PLink genotype data files to an Affymetrix-style format for use by AutoSNPa, DominantMapper, IBDfinder, Sample and other programs.

GeneTIER

Candidate gene prioritisation based on gene expression profiles.

QVregion

Calculates the quality of the sequence in an electropherogram file.

SNPannotator

Adds back SNP annotation data to Affymetrix SNP6 genotype files, so that they can be used by other analysis programs.

MerlinViewer

MerlinViewer visiualizes the results of high density SNP chip analysis using the Merlin application. The results are displayed as a scatter graph of the LOD, HLOD or Alpha score against chromosomal position.